We are currently updating the Sponge Genetree Server! (I hope you like it). Trees are successively updates now so please be patient. Apologies for the inconvenience
Barcoding fragments updated: 28S C-region fragment (new, 1095 taxa) & CO1 Folmer (2471 taxa)
Major round of updates in progress. Watch this space!
CO1 of Hexactinellida updated
Data of Voigt & Wörheide added for download.
CO1 "Folmer" (1990 taxa) and I3M11 update (356 taxa) now as downloadable pdf with active links to NCBI Genbank
Dataset page launched
Updates of all trees in progress. Watch this space!
Demospongiae SSU (18S) updated. Currently 890 OTUs.
Demospongiae CO1 (Folmer) updated. Currently 890 OTUs.
Demospongiae LSU (28S D13-E13) updated. Currently 255 OTUs
Demospongiae LSU (28S D1-D14) updated. Currently 510 OTUs. Hexactinellida and Calcarea sections edited.
Demospongiae CO1 (I3M11) updated. Currently 174 OTUs.
Demospongiae SSU (18S) updated. Currently 235 OTUs.
Demospongiae CO1 (Folmer) updated. Currently 978 OTUs.
Full round of updates in progress.
Folmer RAxML CO1 tree updated as well (795 OTUs).
New Folmer CO1 tree (MrBayes) with barcoding sequences. RAxML in progress. 795 OTUs.
January 2012: Implementation of new barcoding data. Complete set of updates in progress
January 2011: Complete set of updates in progress
Minor updates of text and links
Implementation of SSU (18S) and I3M11 (CO1)
August - September 2010: hundreds of new CO1 sequences expected due to the Sponge Barcoding Project. Watch this space!
Automatization in development by Sergio Vargas
Starting January 17 2010: New Updates for CO1
Updates CO1 nucleotides
The SGS moved to Munich
SGS-Reference published in: Zootaxa 1939:58-60 (2008)
Calcarea included, Hexactinellida included
Demosponge trees: Version: August 04 2008, Taxa: CO1: 266, LSU: 510